Historic museum samples provide evidence for a recent replacement of Wolbachia types in European Drosophila melanogaster.
|25 Nov 2023
|Naturhistorisches Museum Wien (NHMW)
|Central Research Laboratories
CC BY 4.0 International
|Drosophila Evolutionary history Genomics Host symbiont interactions Museomics Wolbachia
|Denmark, Finland, Germany, Portugal, Sweden
This dataset contains the newly assembled Wolbachia draft genomes and assembly statistics of eight previously published historic Drosophila melanogaster museum samples sequenced with Illumina (Shpak et al. 2023) and of nine previously unpublished contemporary and newly assembled Wolbachia draft genomes that were newly sequenced with Oxford Nanopore technology. All historic samples were comprised of wMelCS Wolbachia variants collected 200-90 years ago in Sweden, Denmark and Germany. The contemporary samples consisted of wMel and wMelCS variants from Portugal and Finland and of wMel, wMelCS and wMelPop variants in long-standing Drosophila lab stocks.
|FWF Austrian Science Fund
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|is a zipped folder with all assembled genomes in gzipped FASTA format
|contains BlobPlots for all genomes
|contains all reports from the BUSCO analyses including all predicted gene models
|A README file with descriptions of the data
|is a table with all synonymously used sample IDs